BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026C08LP1|AL428520
(879 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1573 1694 0.0
>3x_Contig1573
Length = 10819
Score = 1694 bits (852), Expect = 0.0
Identities = 871/879 (99%), Gaps = 1/879 (0%)
Strand = Plus / Plus
Query: 1 atctttccccgtacggccagtaataagatcatgggtggccttcgagtcagatttgatgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8816 atctttccccgtacggccagtaataagatcatgggtggccttcgagtcagatttgatgat 8875
Query: 61 atctaacaaaacttttatgaatccgttttccacactcccatcaatttcatctgcaataag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8876 atctaacaaaacttttatgaatccgttttccacactcccatcaatttcatctgcaataag 8935
Query: 121 acagactggtttgtcattgaaagtatggttaaacaatgcgttttgaaccttgtgtctgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8936 acagactggtttgtcattgaaagtatggttaaacaatgcgttttgaaccttgtgtctgac 8995
Query: 181 tctatcgccagctctttcatcacttgcattaatctccatcaccgaataacccgcttgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8996 tctatcgccagctctttcatcacttgcattaatctccatcaccgaataacccgcttgttt 9055
Query: 241 agcaacaacatgggctacactagtcttccctattccgggggggccatgaatcagaagaat 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 9056 agcaacaacatgggctacactagtcttccctattccggggggtccatgaatcagaagaat 9115
Query: 301 tcgtttcattggtctttttwaagggtccgcatactcatcgcttgcatcattttctgggtt 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 9116 tcgtttcattggtctttttaaagggtccgcatactcatcgcttgcatcattttctgggtt 9175
Query: 361 actgtgtttcttaaacgtcgttrattcaggsaattcttcatcaaacaccaacggtgacca 420
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 9176 actgtgtttcttaaacgtcgttaattcaggcaattcttcatcaaacaccaacggtgacca 9235
Query: 421 ttgccttaaccagaaaagaactctacgattgagacgttcgttacccacaagatccagaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9236 ttgccttaaccagaaaagaactctacgattgagacgttcgttacccacaagatccagaaa 9295
Query: 481 cttgtgtggtctccatttctcagtccataaagtgtttccagacgntaatctcttcttgtc 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 9296 cttgtgtggtctccatttctcagtccataaagtgtttccagacgataatctcttcttgtc 9355
Query: 541 cttgtccttgtctatatccttctgaggttgtgaattgttagtcggagtcgagtctccaac 600
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 9356 cttgtccttgtctatatccttctgaggttgtaaattgttagtcggagtcgagtctccaac 9415
Query: 601 atcattctctatcctatccagtaacgcattgatatttattccatacgcttcatcagcgga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9416 atcattctctatcctatccagtaacgcattgatatttattccatacgcttcatcagcgga 9475
Query: 661 ccaactggtatcaatttgtgctgggtccttccttttctttctcaatggaatcactgatcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9476 ccaactggtatcaatttgtgctgggtccttccttttctttctcaatggaatcactgatcc 9535
Query: 721 attagaagagacgaacgtcttcacattaggatcctgtgcttcaacctgtacttgtaaatc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9536 attagaagagacgaacgtcttcacattaggatcctgtgcttcaacctgtacttgtaaatc 9595
Query: 781 tctttccactttcgagtgcccgagaaagtgaatcgcttatcgaagctgcgaatgtcggca 840
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 9596 tctttccactttcgagtgcccgag-aagtgaatcgcttatcgaagctgcgaatgtcggca 9654
Query: 841 ggctaggcatggcaaggggkacgccgtatgatgtggttt 879
||||||||||||||||||| |||||||||||||||||||
Sbjct: 9655 ggctaggcatggcaaggggtacgccgtatgatgtggttt 9693
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5936
Number of Sequences: 1807
Number of extensions: 5936
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 879
length of database: 10,358,551
effective HSP length: 16
effective length of query: 863
effective length of database: 10,329,639
effective search space: 8914478457
effective search space used: 8914478457
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)